from    
to    
search  

 


学堂班系列讲座:“化学思维与材料创新---非传统结构荧光材料的高效构建”
重新认识酸雨中的化学
基于纳米晶粒自组装材料的智能微纳器件
美院科研与主题创作谈
报告题目:
Residue contact in protein structure: sidechain anisotropy, residue cluster and contact network
 报告人:
孙卫涛
副研究员,清华大学周培源应用数学研究中心
报告时间:
2009-09-10 10:00
报告地点:
清华大学科学馆118会议室
主办单位:
清华大学周培源应用数学研究中心
  简介:

Abstract: Residue cluster play essential role in stabilizing protein structures in the form of a complex network. Considering the anisortopy of 20 amino acids, atom distance criteria (ADC) method is proposed for determination of residue sidechains contact. According to the local clustering coefficient, residue clusters can be classified either as close contact cluster or open contact cluster. Statistical analysis reveals that close contact clusters are the residue cores stabling secondary structures. Whereas most of open contact cluster are bridges connecting neighbor clusters. It is shown that the residue contact network is scale-free distributed and the cluster size is more like a log-normal distribution. The analysis of average cluster size for 424 PDB reveal that protein structures have a critical size at which proteins can be considered as well-condensed.

今日相关信息
『清华信息大讲堂』第 38 讲:大学在国际...
 
同类别相关信息
Physiological Control of Cyber-Medi...
《科学与哲学》第七讲--“分数阶微积分...
《科学与哲学》第六讲--超越还原论:从...
清华企业家讲堂——经管学院副院长陈煜波...
Pushing Secure Multi-Party Computat...
学术活动