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集成电路学院光刻技术研讨会
大自然启发的表面物联网
基于表面“中心-环境”特征模型的机器学习材料设计:从钙钛矿OER到纳米碳生长
学堂班系列讲座:“基于微流控芯片的肿瘤液体活检新方法”
报告题目:
Extraction and Application of Geometrical Features from 3-dimensional Images for Protein Structure Prediction
 报告人:
Jing He
Department of Computer Science
CREST Center for Bioinformatics and Computational Biology
New Mexico State University, USA
报告时间:
2007-01-10 15:00
报告地点:
东主楼10-309
主办单位:
电子系
  简介:

  报告题目:

内容简介:Protein structure prediction is also known as the protein folding problem that attracts the scientists from many disciplines. Typically, the structure of a protein is predicted if its amino acid sequence is given. However, current structure prediction methods are still far from being mature. We have been investigating the problem of combining the structure prediction methods with geometrical constraints that can be obtained from the low resolution 3-dimensional image of protein density. We have developed a gradient based segmentation method to identify the helices of a protein. Using the identified helices as geometrical constraints, we developed a method to analyze a large set of possible model structures generated by Rosetta, a structure prediction software. The possible sequence assignment and topology of the visualized helices can be derived. (There is an opening for Postdoctoral Research Position)

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